Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm15580-201ENSMUST00000121587 556 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm3654-201ENSMUST00000173038 909 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Mrip-ps-201ENSMUST00000184613 940 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm18443-201ENSMUST00000185358 556 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm3791-201ENSMUST00000220790 768 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm14332-201ENSMUST00000121982 899 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm8696-201ENSMUST00000174777 385 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Cct7-203ENSMUST00000204592 1544 ntTSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm10176-201ENSMUST00000159707 2264 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 AC154262.2-201ENSMUST00000224310 2293 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Zfp69-202ENSMUST00000106281 1764 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm15610-201ENSMUST00000120584 195 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm4996-201ENSMUST00000122042 784 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Mir6921-201ENSMUST00000183719 80 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Il24-202ENSMUST00000187650 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm37506-201ENSMUST00000192008 143 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 AC124400.2-201ENSMUST00000224939 253 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ush2AQ2QI47 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm22751-201ENSMUST00000102077 109 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Mir692-3-201ENSMUST00000102079 109 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Mir692-2-201ENSMUST00000102081 109 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm38376-201ENSMUST00000195493 2253 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm12619-201ENSMUST00000117369 385 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm12420-201ENSMUST00000119869 1048 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Mir6972-201ENSMUST00000184774 64 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms