Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 AC159899.1-201ENSMUST00000214024 733 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm6291-201ENSMUST00000179994 309 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Mir6396-201ENSMUST00000183603 111 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm17825-201ENSMUST00000206836 794 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm24231-201ENSMUST00000104315 133 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm15793-201ENSMUST00000121857 495 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Ighv1-33-201ENSMUST00000193220 350 ntBASIC10.5□□□□□ -0.73
Chd8Q09XV5 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd8Q09XV5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm24066-201ENSMUST00000104515 131 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm15197-201ENSMUST00000120526 478 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm6939-201ENSMUST00000122029 864 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm16547-201ENSMUST00000159474 293 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm14760-201ENSMUST00000121831 999 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm13898-201ENSMUST00000141865 610 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 H2-Pb-201ENSMUST00000172731 531 ntBASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms