Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc4Q08624 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc4Q08624 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc4Q08624 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc4Q08624 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc4Q08624 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc4Q08624 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Cog3-203ENSMUST00000227473 4197 ntBASIC11.31□□□□□ -0.6
Hoxc4Q08624 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Gm16166-201ENSMUST00000118291 787 ntBASIC11.31□□□□□ -0.6
Hoxc4Q08624 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Gm44315-201ENSMUST00000203041 219 ntBASIC11.31□□□□□ -0.6
Hoxc4Q08624 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc4Q08624 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm16219-201ENSMUST00000120096 274 ntBASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm1848-201ENSMUST00000120711 789 ntBASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm10731-201ENSMUST00000181171 448 ntBASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm7504-201ENSMUST00000201449 424 ntBASIC11.3□□□□□ -0.6
Hoxc4Q08624 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.3□□□□□ -0.6
Hoxc4Q08624 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc4Q08624 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.29□□□□□ -0.6
Hoxc4Q08624 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms