Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Gm11960-201ENSMUST00000122068 925 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 Gm24844-201ENSMUST00000158679 127 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 Gm3150-201ENSMUST00000166418 204 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox8Q04886 Gm24514-201ENSMUST00000174961 285 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox8Q04886 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox8Q04886 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox8Q04886 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox8Q04886 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox8Q04886 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox8Q04886 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Sox8Q04886 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.42□□□□□ -0.42
Sox8Q04886 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Sox8Q04886 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox8Q04886 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox8Q04886 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Gm22920-201ENSMUST00000102175 109 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox8Q04886 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Sox8Q04886 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox8Q04886 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.41□□□□□ -0.42
Sox8Q04886 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox8Q04886 Gm8459-201ENSMUST00000162504 760 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox8Q04886 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox8Q04886 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Gm12407-201ENSMUST00000180219 324 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Gm5982-201ENSMUST00000196234 512 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Gm9132-201ENSMUST00000210182 832 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox8Q04886 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox8Q04886 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.41□□□□□ -0.42
Sox8Q04886 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox8Q04886 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.4□□□□□ -0.42
Sox8Q04886 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.4□□□□□ -0.42
Sox8Q04886 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 Mir8115-201ENSMUST00000184992 119 ntBASIC12.4□□□□□ -0.42
Sox8Q04886 Gm43916-201ENSMUST00000205062 967 ntBASIC12.4□□□□□ -0.42
Sox8Q04886 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.4□□□□□ -0.42
Sox8Q04886 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox8Q04886 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.4□□□□□ -0.42
Sox8Q04886 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox8Q04886 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms