Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn6Q03958 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Pfdn6Q03958 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.86□□□□□ -0.51
Pfdn6Q03958 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm14723-201ENSMUST00000118686 215 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm25668-201ENSMUST00000157700 129 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm43962-201ENSMUST00000203898 190 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.85□□□□□ -0.51
Pfdn6Q03958 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn6Q03958 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Mir8109-201ENSMUST00000184375 117 ntBASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm5455-201ENSMUST00000058710 715 ntBASIC11.84□□□□□ -0.51
Pfdn6Q03958 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.84□□□□□ -0.51
Pfdn6Q03958 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn6Q03958 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn6Q03958 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn6Q03958 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn6Q03958 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms