Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GabpaQ00422 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GabpaQ00422 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.34□□□□□ -0.27
GabpaQ00422 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.34□□□□□ -0.27
GabpaQ00422 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.34□□□□□ -0.27
GabpaQ00422 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Mir6998-201ENSMUST00000183343 64 ntBASIC13.34□□□□□ -0.27
GabpaQ00422 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GabpaQ00422 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.34□□□□□ -0.27
GabpaQ00422 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GabpaQ00422 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GabpaQ00422 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GabpaQ00422 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GabpaQ00422 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
GabpaQ00422 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GabpaQ00422 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
GabpaQ00422 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GabpaQ00422 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GabpaQ00422 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GabpaQ00422 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GabpaQ00422 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
GabpaQ00422 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
GabpaQ00422 Gm9089-201ENSMUST00000122027 526 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.33□□□□□ -0.28
GabpaQ00422 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Gm26047-201ENSMUST00000157308 113 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GabpaQ00422 Gm38314-201ENSMUST00000195709 625 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Gm26047-202ENSMUST00000198840 115 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Gm44315-201ENSMUST00000203041 219 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GabpaQ00422 Gm4978-201ENSMUST00000071565 801 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.33□□□□□ -0.28
GabpaQ00422 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GabpaQ00422 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GabpaQ00422 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GabpaQ00422 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GabpaQ00422 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
GabpaQ00422 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GabpaQ00422 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GabpaQ00422 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GabpaQ00422 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GabpaQ00422 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms