Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm14395-201ENSMUST00000120494 563 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm15620-201ENSMUST00000122949 270 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm43912-201ENSMUST00000204352 538 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm44882-201ENSMUST00000205702 802 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm45113-201ENSMUST00000207518 165 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.9□□□□□ -0.66
Cacna1aP97445 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm12712-201ENSMUST00000120676 801 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm25554-201ENSMUST00000158075 113 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm6450-201ENSMUST00000200896 574 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cacna1aP97445 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.9□□□□□ -0.66
Cacna1aP97445 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.9□□□□□ -0.66
Cacna1aP97445 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cacna1aP97445 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cacna1aP97445 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cacna1aP97445 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cacna1aP97445 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cacna1aP97445 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cacna1aP97445 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm11500-201ENSMUST00000118237 601 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm8574-201ENSMUST00000203207 924 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm23912-201ENSMUST00000104687 87 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm11619-201ENSMUST00000117474 237 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm8451-201ENSMUST00000170338 447 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm37981-201ENSMUST00000194280 535 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm44315-201ENSMUST00000203041 219 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm7536-201ENSMUST00000077389 444 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm5453-201ENSMUST00000080866 447 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms