Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm2553-201ENSMUST00000215986 605 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.79□□□□□ -0.36
Trim43cP86449 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim43cP86449 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim43cP86449 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim43cP86449 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.79□□□□□ -0.36
Trim43cP86449 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Trim43cP86449 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim43cP86449 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Gm25881-201ENSMUST00000157783 103 ntBASIC12.79□□□□□ -0.36
Trim43cP86449 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Gm45113-201ENSMUST00000207518 165 ntBASIC12.79□□□□□ -0.36
Trim43cP86449 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.79□□□□□ -0.36
Trim43cP86449 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim43cP86449 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43cP86449 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm7857-201ENSMUST00000117957 358 ntBASIC12.78□□□□□ -0.36
Trim43cP86449 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm25732-201ENSMUST00000175168 60 ntBASIC12.78□□□□□ -0.36
Trim43cP86449 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.78□□□□□ -0.36
Trim43cP86449 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim43cP86449 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim43cP86449 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.78□□□□□ -0.36
Trim43cP86449 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.78□□□□□ -0.36
Trim43cP86449 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43cP86449 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim43cP86449 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43cP86449 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43cP86449 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43cP86449 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim43cP86449 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43cP86449 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim43cP86449 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43cP86449 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43cP86449 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms