Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm25214-201ENSMUST00000104573 129 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim43bP86448 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm12314-201ENSMUST00000118104 538 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim43bP86448 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm9136-201ENSMUST00000193368 454 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Gm44958-201ENSMUST00000203734 736 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim43bP86448 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Mir433-201ENSMUST00000093564 124 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Gm8420-201ENSMUST00000097103 598 ntBASIC12.14□□□□□ -0.47
Trim43bP86448 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim43bP86448 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.13□□□□□ -0.47
Trim43bP86448 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim43bP86448 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim43bP86448 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim43bP86448 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trim43bP86448 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim43bP86448 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm13875-201ENSMUST00000120162 282 ntBASIC12.13□□□□□ -0.47
Trim43bP86448 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim43bP86448 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm13570-201ENSMUST00000140763 309 ntBASIC12.13□□□□□ -0.47
Trim43bP86448 Gm16570-201ENSMUST00000161951 436 ntBASIC12.13□□□□□ -0.47
Trim43bP86448 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim43bP86448 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm10076-201ENSMUST00000073238 384 ntBASIC12.13□□□□□ -0.47
Trim43bP86448 Gm10312-201ENSMUST00000078515 489 ntBASIC12.13□□□□□ -0.47
Trim43bP86448 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim43bP86448 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim43bP86448 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43bP86448 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Gm14130-201ENSMUST00000118417 987 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms