Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.6□□□□□ -0.55
Shox2P70390 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Gm5419-201ENSMUST00000119301 527 ntBASIC11.6□□□□□ -0.55
Shox2P70390 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Shox2P70390 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.6□□□□□ -0.55
Shox2P70390 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Shox2P70390 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Gm43966-201ENSMUST00000203301 612 ntBASIC11.6□□□□□ -0.55
Shox2P70390 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.6□□□□□ -0.55
Shox2P70390 Gm7287-201ENSMUST00000205267 602 ntBASIC11.6□□□□□ -0.55
Shox2P70390 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.6□□□□□ -0.55
Shox2P70390 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.6□□□□□ -0.55
Shox2P70390 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.6□□□□□ -0.55
Shox2P70390 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.6□□□□□ -0.55
Shox2P70390 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.6□□□□□ -0.55
Shox2P70390 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.59□□□□□ -0.55
Shox2P70390 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.59□□□□□ -0.55
Shox2P70390 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Shox2P70390 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Shox2P70390 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Gm12463-201ENSMUST00000118271 849 ntBASIC11.59□□□□□ -0.55
Shox2P70390 Gm26308-201ENSMUST00000157768 69 ntBASIC11.59□□□□□ -0.55
Shox2P70390 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Shox2P70390 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.59□□□□□ -0.55
Shox2P70390 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.59□□□□□ -0.55
Shox2P70390 Gm19994-201ENSMUST00000217086 586 ntBASIC11.59□□□□□ -0.55
Shox2P70390 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.59□□□□□ -0.55
Shox2P70390 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.59□□□□□ -0.55
Shox2P70390 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.59□□□□□ -0.55
Shox2P70390 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.59□□□□□ -0.55
Shox2P70390 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.59□□□□□ -0.55
Shox2P70390 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Shox2P70390 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Shox2P70390 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Shox2P70390 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Shox2P70390 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.59□□□□□ -0.55
Shox2P70390 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shox2P70390 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Shox2P70390 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Shox2P70390 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Shox2P70390 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Nln-205ENSMUST00000224945 2486 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms