Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msx3P70354 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.09□□□□□ -0.47
Msx3P70354 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Gm25668-201ENSMUST00000157700 129 ntBASIC12.09□□□□□ -0.47
Msx3P70354 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.09□□□□□ -0.47
Msx3P70354 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Gm6450-201ENSMUST00000200896 574 ntBASIC12.09□□□□□ -0.47
Msx3P70354 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Gm18065-201ENSMUST00000221395 526 ntBASIC12.09□□□□□ -0.47
Msx3P70354 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msx3P70354 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Msx3P70354 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msx3P70354 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx3P70354 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx3P70354 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx3P70354 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Msx3P70354 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx3P70354 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx3P70354 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.08□□□□□ -0.48
Msx3P70354 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Gm25890-201ENSMUST00000177643 165 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm22614-201ENSMUST00000178300 165 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm29615-201ENSMUST00000185371 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28937-201ENSMUST00000185413 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28224-201ENSMUST00000186078 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm29001-201ENSMUST00000186177 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28292-201ENSMUST00000186593 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm29400-201ENSMUST00000187208 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28101-201ENSMUST00000187608 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm29076-201ENSMUST00000187689 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28302-201ENSMUST00000187931 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28646-201ENSMUST00000188220 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28662-201ENSMUST00000188446 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28251-201ENSMUST00000188835 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28205-201ENSMUST00000189177 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm29032-201ENSMUST00000189797 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm28695-201ENSMUST00000190300 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm37448-201ENSMUST00000192795 697 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm37318-201ENSMUST00000194325 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm38117-201ENSMUST00000194653 939 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm38017-201ENSMUST00000194768 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm37287-201ENSMUST00000195449 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm37793-201ENSMUST00000195548 695 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Lect2-202ENSMUST00000225183 823 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Msx3P70354 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Gm22042-201ENSMUST00000082989 165 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Gm26110-201ENSMUST00000083971 165 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Msx3P70354 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Msx3P70354 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msx3P70354 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx3P70354 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Msx3P70354 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.08□□□□□ -0.48
Msx3P70354 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms