Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.86□□□□□ -0.03
Msh6P54276 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Msh6P54276 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.86□□□□□ -0.03
Msh6P54276 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Msh6P54276 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Msh6P54276 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Msh6P54276 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm13117-201ENSMUST00000120894 691 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.85□□□□□ -0.03
Msh6P54276 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.85□□□□□ -0.03
Msh6P54276 Mir6923-201ENSMUST00000184592 72 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Gm18514-201ENSMUST00000218980 436 ntBASIC14.85□□□□□ -0.03
Msh6P54276 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.85□□□□□ -0.03
Msh6P54276 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Msh6P54276 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Msh6P54276 Lect2-202ENSMUST00000225183 823 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Gm4604-201ENSMUST00000025040 390 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Msh6P54276 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Msh6P54276 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.85□□□□□ -0.03
Msh6P54276 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm7541-201ENSMUST00000118361 535 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.85□□□□□ -0.03
Msh6P54276 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm26989-201ENSMUST00000182608 749 ntBASIC14.85□□□□□ -0.03
Msh6P54276 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Msh6P54276 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.85□□□□□ -0.03
Msh6P54276 Gm19587-201ENSMUST00000191395 545 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Gm17825-201ENSMUST00000206836 794 ntBASIC14.85□□□□□ -0.03
Msh6P54276 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msh6P54276 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.85□□□□□ -0.03
Msh6P54276 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.85□□□□□ -0.03
Msh6P54276 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Msh6P54276 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Msh6P54276 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Msh6P54276 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Msh6P54276 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.84□□□□□ -0.03
Msh6P54276 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Msh6P54276 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Msh6P54276 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Mir671-201ENSMUST00000102432 98 ntBASIC14.84□□□□□ -0.03
Msh6P54276 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.84□□□□□ -0.03
Msh6P54276 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.84□□□□□ -0.03
Msh6P54276 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.84□□□□□ -0.03
Msh6P54276 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.84□□□□□ -0.03
Msh6P54276 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Msh6P54276 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msh6P54276 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.83□□□□□ -0.03
Msh6P54276 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msh6P54276 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms