Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm14227-201ENSMUST00000119431 629 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Gm11736-201ENSMUST00000121468 505 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.46□□□□□ -0.57
Lbx1P52955 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.46□□□□□ -0.57
Lbx1P52955 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.46□□□□□ -0.57
Lbx1P52955 Gm21577-201ENSMUST00000190823 697 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Gm20802-201ENSMUST00000190832 698 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lbx1P52955 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.46□□□□□ -0.57
Lbx1P52955 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lbx1P52955 Gm5292-201ENSMUST00000073317 580 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.46□□□□□ -0.57
Lbx1P52955 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Lbx1P52955 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.46□□□□□ -0.58
Lbx1P52955 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lbx1P52955 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lbx1P52955 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.45□□□□□ -0.58
Lbx1P52955 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm25569-201ENSMUST00000157175 131 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Gm22763-201ENSMUST00000158374 107 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.45□□□□□ -0.58
Lbx1P52955 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm43506-201ENSMUST00000200675 753 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Lbx1P52955 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm18042-201ENSMUST00000219887 790 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 AC165260.3-201ENSMUST00000225101 665 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lbx1P52955 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm6478-201ENSMUST00000099450 742 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lbx1P52955 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lbx1P52955 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lbx1P52955 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.45□□□□□ -0.58
Lbx1P52955 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lbx1P52955 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Lbx1P52955 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lbx1P52955 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lbx1P52955 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms