Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
GdnfP48540 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.38□□□□□ -0.75
GdnfP48540 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.38□□□□□ -0.75
GdnfP48540 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.38□□□□□ -0.75
GdnfP48540 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
GdnfP48540 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.38□□□□□ -0.75
GdnfP48540 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.38□□□□□ -0.75
GdnfP48540 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.38□□□□□ -0.75
GdnfP48540 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
GdnfP48540 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
GdnfP48540 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
GdnfP48540 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
GdnfP48540 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Rgr-203ENSMUST00000225070 4704 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gm15074-201ENSMUST00000117603 936 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Gm13333-201ENSMUST00000119424 781 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.37□□□□□ -0.75
GdnfP48540 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.37□□□□□ -0.75
GdnfP48540 Gm10608-202ENSMUST00000213924 676 ntBASIC10.37□□□□□ -0.75
GdnfP48540 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.37□□□□□ -0.75
GdnfP48540 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.37□□□□□ -0.75
GdnfP48540 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.37□□□□□ -0.75
GdnfP48540 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
GdnfP48540 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
GdnfP48540 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
GdnfP48540 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
GdnfP48540 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
GdnfP48540 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
GdnfP48540 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
GdnfP48540 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
GdnfP48540 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
GdnfP48540 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Gm4986-201ENSMUST00000119731 549 ntBASIC10.36□□□□□ -0.75
GdnfP48540 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.36□□□□□ -0.75
GdnfP48540 Gm13786-201ENSMUST00000122371 333 ntBASIC10.36□□□□□ -0.75
GdnfP48540 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.36□□□□□ -0.75
GdnfP48540 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms