Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Snora73a-201ENSMUST00000082453 205 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox2P48432 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Gm19221-201ENSMUST00000221827 1477 ntBASIC11□□□□□ -0.65
Sox2P48432 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox2P48432 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Gm4986-201ENSMUST00000119731 549 ntBASIC11□□□□□ -0.65
Sox2P48432 Gm7722-201ENSMUST00000120646 741 ntBASIC11□□□□□ -0.65
Sox2P48432 Gm14832-201ENSMUST00000121289 322 ntBASIC11□□□□□ -0.65
Sox2P48432 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11□□□□□ -0.65
Sox2P48432 Gm2546-201ENSMUST00000182630 991 ntBASIC11□□□□□ -0.65
Sox2P48432 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11□□□□□ -0.65
Sox2P48432 Gm38241-201ENSMUST00000192641 898 ntBASIC11□□□□□ -0.65
Sox2P48432 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11□□□□□ -0.65
Sox2P48432 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Gm10254-201ENSMUST00000052888 867 ntBASIC11□□□□□ -0.65
Sox2P48432 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sox2P48432 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11□□□□□ -0.65
Sox2P48432 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox2P48432 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox2P48432 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox2P48432 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox2P48432 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 Gm11478-201ENSMUST00000117851 599 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Gm5419-201ENSMUST00000119301 527 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox2P48432 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
Sox2P48432 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox2P48432 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Sox2P48432 Gm42627-201ENSMUST00000197347 224 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Gm19994-201ENSMUST00000217086 586 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox2P48432 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox2P48432 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Sox2P48432 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox2P48432 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.99□□□□□ -0.65
Sox2P48432 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms