Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Gm18893-201ENSMUST00000198416 943 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfx1P48377 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfx1P48377 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Gm43937-201ENSMUST00000204640 3122 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfx1P48377 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.03□□□□□ -0.16
Rfx1P48377 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfx1P48377 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Gm6266-201ENSMUST00000203844 806 ntBASIC14.03□□□□□ -0.16
Rfx1P48377 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rfx1P48377 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx1P48377 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Gm10254-201ENSMUST00000052888 867 ntBASIC14.03□□□□□ -0.16
Rfx1P48377 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx1P48377 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfx1P48377 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx1P48377 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Rfx1P48377 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Rfx1P48377 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Rgr-203ENSMUST00000225070 4704 ntBASIC14.02□□□□□ -0.16
Rfx1P48377 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Rfx1P48377 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfx1P48377 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx1P48377 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfx1P48377 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.02□□□□□ -0.17
Rfx1P48377 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rfx1P48377 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx1P48377 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rfx1P48377 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rfx1P48377 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms