Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm3096-201ENSMUST00000185770 364 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm43433-201ENSMUST00000196573 481 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm4607-201ENSMUST00000206649 577 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm18054-201ENSMUST00000207539 555 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.34□□□□□ -0.59
Tnfsf4P43488 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tnfsf4P43488 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Tnfsf4P43488 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Tnfsf4P43488 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.33□□□□□ -0.6
Tnfsf4P43488 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Gm5070-201ENSMUST00000177599 862 ntBASIC11.33□□□□□ -0.6
Tnfsf4P43488 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Gm19187-201ENSMUST00000206781 892 ntBASIC11.33□□□□□ -0.6
Tnfsf4P43488 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.33□□□□□ -0.6
Tnfsf4P43488 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tnfsf4P43488 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms