Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.66□□□□□ -0.86
VhlP40338 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.66□□□□□ -0.86
VhlP40338 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Gm12390-201ENSMUST00000117897 397 ntBASIC9.66□□□□□ -0.86
VhlP40338 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.66□□□□□ -0.86
VhlP40338 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.66□□□□□ -0.86
VhlP40338 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.66□□□□□ -0.86
VhlP40338 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
VhlP40338 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.66□□□□□ -0.86
VhlP40338 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 Gm6222-202ENSMUST00000182143 629 ntBASIC9.66□□□□□ -0.86
VhlP40338 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VhlP40338 Gm38314-201ENSMUST00000195709 625 ntBASIC9.66□□□□□ -0.86
VhlP40338 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.66□□□□□ -0.86
VhlP40338 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.66□□□□□ -0.86
VhlP40338 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
VhlP40338 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
VhlP40338 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
VhlP40338 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VhlP40338 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VhlP40338 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Gm11960-201ENSMUST00000122068 925 ntBASIC9.65□□□□□ -0.86
VhlP40338 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.65□□□□□ -0.86
VhlP40338 Mir1938-201ENSMUST00000158746 100 ntBASIC9.65□□□□□ -0.86
VhlP40338 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
VhlP40338 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.65□□□□□ -0.86
VhlP40338 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.65□□□□□ -0.86
VhlP40338 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.65□□□□□ -0.86
VhlP40338 Gm19994-201ENSMUST00000217086 586 ntBASIC9.65□□□□□ -0.86
VhlP40338 Lect2-202ENSMUST00000225183 823 ntBASIC9.65□□□□□ -0.86
VhlP40338 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Gm10254-201ENSMUST00000052888 867 ntBASIC9.65□□□□□ -0.86
VhlP40338 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
VhlP40338 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VhlP40338 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VhlP40338 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
VhlP40338 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
VhlP40338 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VhlP40338 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
VhlP40338 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms