Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.3□□□□□ -0.6
Cdh4P39038 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm12501-201ENSMUST00000119163 529 ntBASIC11.3□□□□□ -0.6
Cdh4P39038 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.3□□□□□ -0.6
Cdh4P39038 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.3□□□□□ -0.6
Cdh4P39038 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm21811-201ENSMUST00000096485 930 ntBASIC11.3□□□□□ -0.6
Cdh4P39038 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Cdh4P39038 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.3□□□□□ -0.6
Cdh4P39038 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.3□□□□□ -0.6
Cdh4P39038 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdh4P39038 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh4P39038 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Cdh4P39038 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.29□□□□□ -0.6
Cdh4P39038 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.29□□□□□ -0.6
Cdh4P39038 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.29□□□□□ -0.6
Cdh4P39038 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cdh4P39038 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cdh4P39038 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.29□□□□□ -0.6
Cdh4P39038 Gm9136-201ENSMUST00000193368 454 ntBASIC11.29□□□□□ -0.6
Cdh4P39038 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh4P39038 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh4P39038 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh4P39038 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.28□□□□□ -0.6
Cdh4P39038 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh4P39038 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms