Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.29□□□□□ -0.92
Rom1P32958 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.29□□□□□ -0.92
Rom1P32958 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
Rom1P32958 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.29□□□□□ -0.92
Rom1P32958 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 Gm18018-201ENSMUST00000198273 408 ntBASIC9.29□□□□□ -0.92
Rom1P32958 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.29□□□□□ -0.92
Rom1P32958 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.29□□□□□ -0.92
Rom1P32958 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Lect2-202ENSMUST00000225183 823 ntBASIC9.29□□□□□ -0.92
Rom1P32958 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.29□□□□□ -0.92
Rom1P32958 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.29□□□□□ -0.92
Rom1P32958 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
Rom1P32958 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Rom1P32958 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rom1P32958 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rom1P32958 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Rom1P32958 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.28□□□□□ -0.92
Rom1P32958 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms