Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nedd8P29595 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.82□□□□□ -0.68
Nedd8P29595 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.81□□□□□ -0.68
Nedd8P29595 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gm22189-201ENSMUST00000103822 86 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gm23912-201ENSMUST00000104687 87 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gm11700-201ENSMUST00000119409 403 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm27838-201ENSMUST00000184829 128 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.81□□□□□ -0.68
Nedd8P29595 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gm37922-201ENSMUST00000195596 455 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm8396-201ENSMUST00000057361 823 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.81□□□□□ -0.68
Nedd8P29595 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.81□□□□□ -0.68
Nedd8P29595 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nedd8P29595 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nedd8P29595 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.8□□□□□ -0.68
Nedd8P29595 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms