Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Mmp3P28862 Mir6998-201ENSMUST00000183343 64 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.58□□□□□ -0.4
Mmp3P28862 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp3P28862 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.58□□□□□ -0.4
Mmp3P28862 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Mmp3P28862 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.57□□□□□ -0.4
Mmp3P28862 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.57□□□□□ -0.4
Mmp3P28862 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm38210-201ENSMUST00000191944 809 ntBASIC12.57□□□□□ -0.4
Mmp3P28862 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm37905-201ENSMUST00000195310 341 ntBASIC12.57□□□□□ -0.4
Mmp3P28862 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.57□□□□□ -0.4
Mmp3P28862 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mmp3P28862 Gm23105-201ENSMUST00000083719 134 ntBASIC12.57□□□□□ -0.4
Mmp3P28862 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp3P28862 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp3P28862 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.57□□□□□ -0.4
Mmp3P28862 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Mmp3P28862 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Mmp3P28862 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm26013-201ENSMUST00000104404 119 ntBASIC12.56□□□□□ -0.4
Mmp3P28862 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm12247-201ENSMUST00000117585 670 ntBASIC12.56□□□□□ -0.4
Mmp3P28862 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms