Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.92□□□□□ -0.34
Pde6bP23440 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm9630-201ENSMUST00000178304 885 ntBASIC12.92□□□□□ -0.34
Pde6bP23440 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.92□□□□□ -0.34
Pde6bP23440 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.92□□□□□ -0.34
Pde6bP23440 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.92□□□□□ -0.34
Pde6bP23440 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.92□□□□□ -0.34
Pde6bP23440 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.92□□□□□ -0.34
Pde6bP23440 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.92□□□□□ -0.34
Pde6bP23440 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pde6bP23440 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.91□□□□□ -0.34
Pde6bP23440 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6bP23440 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6bP23440 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Pde6bP23440 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Pde6bP23440 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Gm15566-201ENSMUST00000121130 590 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Gm8815-201ENSMUST00000173809 620 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.91□□□□□ -0.34
Pde6bP23440 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.91□□□□□ -0.34
Pde6bP23440 Gm4034-201ENSMUST00000187674 480 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Gm18893-201ENSMUST00000198416 943 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Gm9463-201ENSMUST00000206707 601 ntBASIC12.91□□□□□ -0.34
Pde6bP23440 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6bP23440 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.91□□□□□ -0.34
Pde6bP23440 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pde6bP23440 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pde6bP23440 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pde6bP23440 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pde6bP23440 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pde6bP23440 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pde6bP23440 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pde6bP23440 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms