Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm15711-201ENSMUST00000118889 535 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm28450-201ENSMUST00000187349 638 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm7003-201ENSMUST00000195089 312 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp6P0C0A3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp6P0C0A3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp6P0C0A3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp6P0C0A3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms