Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.34□□□□□ -0.75
P04224 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.34□□□□□ -0.75
P04224 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P04224 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04224 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04224 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.34□□□□□ -0.75
P04224 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.34□□□□□ -0.75
P04224 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
P04224 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.33□□□□□ -0.76
P04224 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
P04224 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
P04224 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.33□□□□□ -0.76
P04224 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
P04224 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
P04224 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.33□□□□□ -0.76
P04224 Gm13492-201ENSMUST00000119772 665 ntBASIC10.33□□□□□ -0.76
P04224 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.33□□□□□ -0.76
P04224 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.33□□□□□ -0.76
P04224 Gm4271-201ENSMUST00000174444 973 ntBASIC10.33□□□□□ -0.76
P04224 Gm24196-201ENSMUST00000179161 110 ntBASIC10.33□□□□□ -0.76
P04224 Gm8652-201ENSMUST00000181363 964 ntBASIC10.33□□□□□ -0.76
P04224 Gm27486-201ENSMUST00000184923 80 ntBASIC10.33□□□□□ -0.76
P04224 Gm27892-201ENSMUST00000185017 106 ntBASIC10.33□□□□□ -0.76
P04224 Gm38092-201ENSMUST00000195600 653 ntBASIC10.33□□□□□ -0.76
P04224 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.33□□□□□ -0.76
P04224 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.33□□□□□ -0.76
P04224 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.33□□□□□ -0.76
P04224 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.33□□□□□ -0.76
P04224 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Gm24136-201ENSMUST00000083374 165 ntBASIC10.33□□□□□ -0.76
P04224 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
P04224 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.33□□□□□ -0.76
P04224 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
P04224 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
P04224 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
P04224 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.33□□□□□ -0.76
P04224 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.33□□□□□ -0.76
P04224 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04224 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.33□□□□□ -0.76
P04224 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
P04224 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.32□□□□□ -0.76
P04224 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.32□□□□□ -0.76
P04224 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P04224 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.32□□□□□ -0.76
P04224 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
P04224 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
P04224 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.32□□□□□ -0.76
P04224 Gm11814-201ENSMUST00000119515 929 ntBASIC10.32□□□□□ -0.76
P04224 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Gm9022-201ENSMUST00000182482 992 ntBASIC10.32□□□□□ -0.76
P04224 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.32□□□□□ -0.76
P04224 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms