Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
TcraP01849 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gm16296-201ENSMUST00000159905 325 ntBASIC8.59□□□□□ -1.03
TcraP01849 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
TcraP01849 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gm7287-201ENSMUST00000205267 602 ntBASIC8.59□□□□□ -1.03
TcraP01849 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC8.59□□□□□ -1.03
TcraP01849 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Gm45384-201ENSMUST00000210451 277 ntBASIC8.59□□□□□ -1.03
TcraP01849 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TcraP01849 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC8.59□□□□□ -1.03
TcraP01849 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gm5703-201ENSMUST00000186658 3973 ntBASIC8.59□□□□□ -1.03
TcraP01849 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.59□□□□□ -1.03
TcraP01849 Gm19165-201ENSMUST00000204453 1982 ntBASIC8.59□□□□□ -1.03
TcraP01849 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gm37333-201ENSMUST00000192904 2251 ntBASIC8.59□□□□□ -1.03
TcraP01849 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.04
TcraP01849 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
TcraP01849 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Gm15897-201ENSMUST00000117770 1486 ntBASIC8.58□□□□□ -1.04
TcraP01849 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.58□□□□□ -1.04
TcraP01849 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
TcraP01849 Gm8805-201ENSMUST00000117848 313 ntBASIC8.58□□□□□ -1.04
TcraP01849 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC8.58□□□□□ -1.04
TcraP01849 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
TcraP01849 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
TcraP01849 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC8.58□□□□□ -1.04
TcraP01849 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 AC162801.1-201ENSMUST00000220612 198 ntBASIC8.58□□□□□ -1.04
TcraP01849 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.58□□□□□ -1.04
TcraP01849 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 n-R5s77-201ENSMUST00000083757 119 ntBASIC8.58□□□□□ -1.04
TcraP01849 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC8.58□□□□□ -1.04
TcraP01849 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TcraP01849 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms