Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.1□□□□□ -0.79
P01798 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.1□□□□□ -0.79
P01798 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
P01798 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.1□□□□□ -0.79
P01798 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.1□□□□□ -0.79
P01798 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P01798 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.1□□□□□ -0.79
P01798 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01798 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P01798 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P01798 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.09□□□□□ -0.79
P01798 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.09□□□□□ -0.79
P01798 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.09□□□□□ -0.79
P01798 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.09□□□□□ -0.79
P01798 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.09□□□□□ -0.79
P01798 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.09□□□□□ -0.79
P01798 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.09□□□□□ -0.79
P01798 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.09□□□□□ -0.79
P01798 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.09□□□□□ -0.79
P01798 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.09□□□□□ -0.79
P01798 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.09□□□□□ -0.79
P01798 Gm43378-201ENSMUST00000199336 582 ntBASIC10.09□□□□□ -0.79
P01798 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.09□□□□□ -0.79
P01798 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.09□□□□□ -0.79
P01798 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.09□□□□□ -0.79
P01798 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
P01798 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P01798 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.09□□□□□ -0.79
P01798 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01798 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01798 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.09□□□□□ -0.79
P01798 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.08□□□□□ -0.8
P01798 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P01798 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.08□□□□□ -0.8
P01798 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01798 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms