Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NgfP01139 Gm45120-201ENSMUST00000208880 408 ntBASIC10.37□□□□□ -0.75
NgfP01139 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.37□□□□□ -0.75
NgfP01139 Gm18065-201ENSMUST00000221395 526 ntBASIC10.37□□□□□ -0.75
NgfP01139 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.37□□□□□ -0.75
NgfP01139 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.37□□□□□ -0.75
NgfP01139 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.37□□□□□ -0.75
NgfP01139 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Gm25517-201ENSMUST00000083865 134 ntBASIC10.37□□□□□ -0.75
NgfP01139 Gm10263-201ENSMUST00000085163 300 ntBASIC10.37□□□□□ -0.75
NgfP01139 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NgfP01139 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
NgfP01139 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NgfP01139 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
NgfP01139 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.37□□□□□ -0.75
NgfP01139 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.37□□□□□ -0.75
NgfP01139 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NgfP01139 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.36□□□□□ -0.75
NgfP01139 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
NgfP01139 Gm11500-201ENSMUST00000118237 601 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm12274-201ENSMUST00000120062 385 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm15549-201ENSMUST00000121595 622 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.36□□□□□ -0.75
NgfP01139 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.36□□□□□ -0.75
NgfP01139 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.36□□□□□ -0.75
NgfP01139 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.36□□□□□ -0.75
NgfP01139 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
NgfP01139 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm42816-201ENSMUST00000198433 325 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
NgfP01139 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
NgfP01139 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.36□□□□□ -0.75
NgfP01139 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.36□□□□□ -0.75
NgfP01139 Gm5468-202ENSMUST00000227851 682 ntBASIC10.36□□□□□ -0.75
NgfP01139 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
NgfP01139 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.36□□□□□ -0.75
NgfP01139 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.36□□□□□ -0.75
NgfP01139 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.36□□□□□ -0.75
NgfP01139 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.36□□□□□ -0.75
NgfP01139 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NgfP01139 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
NgfP01139 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
NgfP01139 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.35□□□□□ -0.75
NgfP01139 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms