Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC17.79■□□□□ 0.44
Polr1aO35134 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Gm26616-202ENSMUST00000195676 3107 ntBASIC17.79■□□□□ 0.44
Polr1aO35134 Gm29100-201ENSMUST00000187564 4410 ntBASIC17.79■□□□□ 0.44
Polr1aO35134 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Polr1aO35134 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Polr1aO35134 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Polr1aO35134 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Polr1aO35134 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Gm6831-202ENSMUST00000213025 1673 ntBASIC17.79■□□□□ 0.44
Polr1aO35134 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Polr1aO35134 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Polr1aO35134 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Polr1aO35134 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr1aO35134 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm11475-201ENSMUST00000118482 476 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 Gm12129-201ENSMUST00000120104 1147 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm5449-201ENSMUST00000081132 357 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm38194-201ENSMUST00000194529 2211 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm20781-201ENSMUST00000193154 693 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 Gm21736-201ENSMUST00000195399 693 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr1aO35134 Gm37014-201ENSMUST00000194723 2253 ntBASIC17.78■□□□□ 0.44
Polr1aO35134 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Gm6157-201ENSMUST00000199935 1897 ntBASIC17.77■□□□□ 0.44
Polr1aO35134 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 AC174797.1-201ENSMUST00000224339 1649 ntBASIC17.77■□□□□ 0.44
Polr1aO35134 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Gm5529-201ENSMUST00000165691 891 ntBASIC17.77■□□□□ 0.44
Polr1aO35134 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Polr1aO35134 Gm43002-201ENSMUST00000200310 155 ntBASIC17.77■□□□□ 0.44
Polr1aO35134 Gm43249-201ENSMUST00000200464 458 ntBASIC17.77■□□□□ 0.44
Polr1aO35134 Gm5340-201ENSMUST00000203733 880 ntBASIC17.77■□□□□ 0.44
Polr1aO35134 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr1aO35134 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms