Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm22594-201ENSMUST00000104251 130 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm15615-201ENSMUST00000118876 198 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm7719-201ENSMUST00000182374 975 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm28833-201ENSMUST00000189671 559 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm18968-201ENSMUST00000221319 862 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NpcdF8VQB8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NpcdF8VQB8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NpcdF8VQB8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NpcdF8VQB8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NpcdF8VQB8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NpcdF8VQB8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm11500-201ENSMUST00000118237 601 ntBASIC14.2□□□□□ -0.14
NpcdF8VQB8 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.2□□□□□ -0.14
NpcdF8VQB8 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.2□□□□□ -0.14
NpcdF8VQB8 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.2□□□□□ -0.14
NpcdF8VQB8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NpcdF8VQB8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm14760-201ENSMUST00000121831 999 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm9089-201ENSMUST00000122027 526 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 AC142266.1-201ENSMUST00000228107 415 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NpcdF8VQB8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.19□□□□□ -0.14
NpcdF8VQB8 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms