Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm10012-201ENSMUST00000078252 192 ntBASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Gm12887B1AVM1 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Gm7488-201ENSMUST00000117148 684 ntBASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.47□□□□□ -0.89
Gm12887B1AVM1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Gm8738-201ENSMUST00000172606 329 ntBASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.47□□□□□ -0.89
Gm12887B1AVM1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms