Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Smim17A0A504 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.63□□□□□ -0.71
Smim17A0A504 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Smim17A0A504 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smim17A0A504 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Smim17A0A504 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.62□□□□□ -0.71
Smim17A0A504 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.62□□□□□ -0.71
Smim17A0A504 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.62□□□□□ -0.71
Smim17A0A504 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.62□□□□□ -0.71
Smim17A0A504 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.62□□□□□ -0.71
Smim17A0A504 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Gm14057-201ENSMUST00000120631 482 ntBASIC10.62□□□□□ -0.71
Smim17A0A504 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Smim17A0A504 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.62□□□□□ -0.71
Smim17A0A504 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Smim17A0A504 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Gm24526-201ENSMUST00000082921 158 ntBASIC10.62□□□□□ -0.71
Smim17A0A504 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Smim17A0A504 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Smim17A0A504 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smim17A0A504 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smim17A0A504 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.61□□□□□ -0.71
Smim17A0A504 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm11964-201ENSMUST00000120982 444 ntBASIC10.61□□□□□ -0.71
Smim17A0A504 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Smim17A0A504 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Smim17A0A504 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm37042-201ENSMUST00000193816 581 ntBASIC10.61□□□□□ -0.71
Smim17A0A504 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smim17A0A504 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smim17A0A504 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim17A0A504 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smim17A0A504 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Syt7-204ENSMUST00000223586 1344 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms