Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 AL732506.1-201ENSMUST00000226420 281 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Erich3-203ENSMUST00000189969 3460 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Syt7-204ENSMUST00000223586 1344 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm22189-201ENSMUST00000103822 86 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Ldha-ps-201ENSMUST00000119390 995 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm15321-201ENSMUST00000121290 288 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm5863-201ENSMUST00000121760 1008 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm9022-201ENSMUST00000182482 992 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm42612-201ENSMUST00000197986 623 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Gm43170-201ENSMUST00000199827 612 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trav8-1A0A075B641 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.4□□□□□ -1.07
Trav8-1A0A075B641 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm5687-201ENSMUST00000118252 640 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms