Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
H2afb3S4R1G7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
H2afb3S4R1G7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb3S4R1G7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb3S4R1G7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb3S4R1G7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
H2afb3S4R1G7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.36■□□□□ 0.53
H2afb3S4R1G7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
H2afb3S4R1G7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.36■□□□□ 0.53
H2afb3S4R1G7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.36■□□□□ 0.53
H2afb3S4R1G7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
H2afb3S4R1G7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb3S4R1G7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Cap2-205ENSMUST00000225824 1634 ntBASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb3S4R1G7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
H2afb3S4R1G7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb3S4R1G7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb3S4R1G7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
H2afb3S4R1G7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb3S4R1G7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Gm45444-201ENSMUST00000211394 898 ntBASIC18.33■□□□□ 0.52
H2afb3S4R1G7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afb3S4R1G7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb3S4R1G7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms