Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Mrpl40Q9Z2Q5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mrpl40Q9Z2Q5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mrpl40Q9Z2Q5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mrpl40Q9Z2Q5 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.39■□□□□ 0.85
Mrpl40Q9Z2Q5 Gm21956-201ENSMUST00000179946 522 ntBASIC20.39■□□□□ 0.85
Mrpl40Q9Z2Q5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mrpl40Q9Z2Q5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Mrpl40Q9Z2Q5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrpl40Q9Z2Q5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrpl40Q9Z2Q5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mrpl40Q9Z2Q5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrpl40Q9Z2Q5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.38■□□□□ 0.85
Mrpl40Q9Z2Q5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrpl40Q9Z2Q5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl40Q9Z2Q5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Mrpl40Q9Z2Q5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl40Q9Z2Q5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mrpl40Q9Z2Q5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mrpl40Q9Z2Q5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Mrpl40Q9Z2Q5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mrpl40Q9Z2Q5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mrpl40Q9Z2Q5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Gm12922-201ENSMUST00000120626 809 ntBASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl40Q9Z2Q5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Mrpl40Q9Z2Q5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl40Q9Z2Q5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl40Q9Z2Q5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 261.3 ms