Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crlf3Q9Z2L7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Crlf3Q9Z2L7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.65■□□□□ 0.9
Crlf3Q9Z2L7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Crlf3Q9Z2L7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crlf3Q9Z2L7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Crlf3Q9Z2L7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Crlf3Q9Z2L7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Crlf3Q9Z2L7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Crlf3Q9Z2L7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Crlf3Q9Z2L7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Crlf3Q9Z2L7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf3Q9Z2L7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Crlf3Q9Z2L7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Crlf3Q9Z2L7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Crlf3Q9Z2L7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crlf3Q9Z2L7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Crlf3Q9Z2L7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms