Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx9Q9WUH2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx9Q9WUH2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx9Q9WUH2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lhx9Q9WUH2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.6■□□□□ 0.73
Lhx9Q9WUH2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx9Q9WUH2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx9Q9WUH2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx9Q9WUH2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx9Q9WUH2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lhx9Q9WUH2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
Lhx9Q9WUH2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.58■□□□□ 0.72
Lhx9Q9WUH2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.58■□□□□ 0.72
Lhx9Q9WUH2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Lhx9Q9WUH2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx9Q9WUH2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx9Q9WUH2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx9Q9WUH2 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.57■□□□□ 0.72
Lhx9Q9WUH2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.57■□□□□ 0.72
Lhx9Q9WUH2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.57■□□□□ 0.72
Lhx9Q9WUH2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx9Q9WUH2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx9Q9WUH2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx9Q9WUH2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx9Q9WUH2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx9Q9WUH2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Gm45417-201ENSMUST00000209533 758 ntBASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx9Q9WUH2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Lhx9Q9WUH2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Lhx9Q9WUH2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx9Q9WUH2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx9Q9WUH2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lhx9Q9WUH2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx9Q9WUH2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms