Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Htra1Q9R118 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Htra1Q9R118 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.84■□□□□ 0.61
Htra1Q9R118 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.84■□□□□ 0.61
Htra1Q9R118 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Htra1Q9R118 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Htra1Q9R118 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Htra1Q9R118 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Htra1Q9R118 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Htra1Q9R118 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Htra1Q9R118 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Htra1Q9R118 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Htra1Q9R118 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Htra1Q9R118 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.82■□□□□ 0.6
Htra1Q9R118 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.82■□□□□ 0.6
Htra1Q9R118 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.82■□□□□ 0.6
Htra1Q9R118 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Htra1Q9R118 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.82■□□□□ 0.6
Htra1Q9R118 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.81■□□□□ 0.6
Htra1Q9R118 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.81■□□□□ 0.6
Htra1Q9R118 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Htra1Q9R118 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.8■□□□□ 0.6
Htra1Q9R118 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Htra1Q9R118 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Htra1Q9R118 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Htra1Q9R118 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Htra1Q9R118 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Htra1Q9R118 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Htra1Q9R118 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Htra1Q9R118 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Htra1Q9R118 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Htra1Q9R118 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.78■□□□□ 0.6
Htra1Q9R118 Cap2-205ENSMUST00000225824 1634 ntBASIC18.78■□□□□ 0.6
Htra1Q9R118 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.78■□□□□ 0.6
Htra1Q9R118 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Htra1Q9R118 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Htra1Q9R118 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Htra1Q9R118 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Htra1Q9R118 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Htra1Q9R118 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Htra1Q9R118 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Htra1Q9R118 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Htra1Q9R118 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Htra1Q9R118 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Htra1Q9R118 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Htra1Q9R118 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Htra1Q9R118 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Htra1Q9R118 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
Htra1Q9R118 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Htra1Q9R118 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.76■□□□□ 0.59
Htra1Q9R118 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.76■□□□□ 0.59
Htra1Q9R118 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Htra1Q9R118 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.75■□□□□ 0.59
Htra1Q9R118 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.75■□□□□ 0.59
Htra1Q9R118 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Htra1Q9R118 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Htra1Q9R118 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Htra1Q9R118 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Htra1Q9R118 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Htra1Q9R118 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.74■□□□□ 0.59
Htra1Q9R118 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms