Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Clca3a1Q9QX15 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a1Q9QX15 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a1Q9QX15 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.28■□□□□ 0.68
Clca3a1Q9QX15 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Gm10232-201ENSMUST00000089221 720 ntBASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clca3a1Q9QX15 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clca3a1Q9QX15 Iqck-206ENSMUST00000208658 2891 ntBASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clca3a1Q9QX15 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clca3a1Q9QX15 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clca3a1Q9QX15 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clca3a1Q9QX15 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms