Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.62■□□□□ 0.25
Crlf1Q9JM58 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.62■□□□□ 0.25
Crlf1Q9JM58 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crlf1Q9JM58 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.61■□□□□ 0.25
Crlf1Q9JM58 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crlf1Q9JM58 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Nespas-201ENSMUST00000143738 1083 ntBASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Crlf1Q9JM58 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Crlf1Q9JM58 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crlf1Q9JM58 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crlf1Q9JM58 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Crlf1Q9JM58 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Crlf1Q9JM58 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.56■□□□□ 0.24
Crlf1Q9JM58 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Gm43530-201ENSMUST00000195920 274 ntBASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crlf1Q9JM58 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crlf1Q9JM58 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Crlf1Q9JM58 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.53■□□□□ 0.24
Crlf1Q9JM58 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms