Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp2Q9JJX7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tdp2Q9JJX7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Tdp2Q9JJX7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.26■□□□□ 0.83
Tdp2Q9JJX7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.25■□□□□ 0.83
Tdp2Q9JJX7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Tdp2Q9JJX7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp2Q9JJX7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp2Q9JJX7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp2Q9JJX7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp2Q9JJX7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.19■□□□□ 0.82
Tdp2Q9JJX7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp2Q9JJX7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms