Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud2Q9JJC9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Herpud2Q9JJC9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Herpud2Q9JJC9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.58■□□□□ 0.89
Herpud2Q9JJC9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Herpud2Q9JJC9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Herpud2Q9JJC9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Herpud2Q9JJC9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Herpud2Q9JJC9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Herpud2Q9JJC9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.58■□□□□ 0.88
Herpud2Q9JJC9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Herpud2Q9JJC9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Herpud2Q9JJC9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herpud2Q9JJC9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud2Q9JJC9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud2Q9JJC9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Gm43173-201ENSMUST00000202246 593 ntBASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud2Q9JJC9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.53■□□□□ 0.88
Herpud2Q9JJC9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Herpud2Q9JJC9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Herpud2Q9JJC9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Herpud2Q9JJC9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.52■□□□□ 0.88
Herpud2Q9JJC9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Herpud2Q9JJC9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herpud2Q9JJC9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Herpud2Q9JJC9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Herpud2Q9JJC9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.52■□□□□ 0.87
Herpud2Q9JJC9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Gm12251-201ENSMUST00000117893 792 ntBASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herpud2Q9JJC9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herpud2Q9JJC9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.5■□□□□ 0.87
Herpud2Q9JJC9 Spcs1-204ENSMUST00000226782 949 ntBASIC20.5■□□□□ 0.87
Herpud2Q9JJC9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Herpud2Q9JJC9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Herpud2Q9JJC9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Herpud2Q9JJC9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Herpud2Q9JJC9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.49■□□□□ 0.87
Herpud2Q9JJC9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.49■□□□□ 0.87
Herpud2Q9JJC9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms