Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rtp4Q9ER80 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtp4Q9ER80 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rtp4Q9ER80 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.18■□□□□ 0.66
Rtp4Q9ER80 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtp4Q9ER80 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtp4Q9ER80 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtp4Q9ER80 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtp4Q9ER80 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtp4Q9ER80 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtp4Q9ER80 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rtp4Q9ER80 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtp4Q9ER80 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Rtp4Q9ER80 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtp4Q9ER80 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtp4Q9ER80 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtp4Q9ER80 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rtp4Q9ER80 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.11■□□□□ 0.65
Rtp4Q9ER80 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.11■□□□□ 0.65
Rtp4Q9ER80 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Gm12922-201ENSMUST00000120626 809 ntBASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms