Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rtl8cQ9D6I0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl8cQ9D6I0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl8cQ9D6I0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl8cQ9D6I0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl8cQ9D6I0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.36■□□□□ 0.53
Rtl8cQ9D6I0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl8cQ9D6I0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl8cQ9D6I0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl8cQ9D6I0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtl8cQ9D6I0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl8cQ9D6I0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl8cQ9D6I0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl8cQ9D6I0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl8cQ9D6I0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl8cQ9D6I0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl8cQ9D6I0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl8cQ9D6I0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rtl8cQ9D6I0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl8cQ9D6I0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtl8cQ9D6I0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl8cQ9D6I0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl8cQ9D6I0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl8cQ9D6I0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl8cQ9D6I0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl8cQ9D6I0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl8cQ9D6I0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl8cQ9D6I0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Gm40881-201ENSMUST00000223397 166 ntBASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rtl8cQ9D6I0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl8cQ9D6I0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl8cQ9D6I0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.3■□□□□ 0.52
Rtl8cQ9D6I0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl8cQ9D6I0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl8cQ9D6I0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtl8cQ9D6I0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtl8cQ9D6I0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.27■□□□□ 0.52
Rtl8cQ9D6I0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.27■□□□□ 0.52
Rtl8cQ9D6I0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtl8cQ9D6I0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.27■□□□□ 0.52
Rtl8cQ9D6I0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtl8cQ9D6I0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtl8cQ9D6I0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtl8cQ9D6I0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms