Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShpkQ9D5J6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShpkQ9D5J6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ShpkQ9D5J6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.16■□□□□ 0.34
ShpkQ9D5J6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShpkQ9D5J6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ShpkQ9D5J6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Gm45855-201ENSMUST00000212546 880 ntBASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ShpkQ9D5J6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ShpkQ9D5J6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShpkQ9D5J6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Terc-201ENSMUST00000082862 423 ntBASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShpkQ9D5J6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShpkQ9D5J6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShpkQ9D5J6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShpkQ9D5J6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShpkQ9D5J6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShpkQ9D5J6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ShpkQ9D5J6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ShpkQ9D5J6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShpkQ9D5J6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShpkQ9D5J6 Gm4799-201ENSMUST00000095396 657 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms