Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.24■□□□□ 0.67
Chaf1bQ9D0N7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chaf1bQ9D0N7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chaf1bQ9D0N7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chaf1bQ9D0N7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chaf1bQ9D0N7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chaf1bQ9D0N7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chaf1bQ9D0N7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chaf1bQ9D0N7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1bQ9D0N7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms