Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Rarb-207ENSMUST00000225921 2756 ntBASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssbp1Q9CYR0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Gm43403-201ENSMUST00000198011 1786 ntBASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ssbp1Q9CYR0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssbp1Q9CYR0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssbp1Q9CYR0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.97□□□□□ -0.01
Ssbp1Q9CYR0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ssbp1Q9CYR0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Golph3-205ENSMUST00000228671 2842 ntBASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssbp1Q9CYR0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Ssbp1Q9CYR0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssbp1Q9CYR0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssbp1Q9CYR0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.94□□□□□ -0.02
Ssbp1Q9CYR0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms