Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx47Q9CWX9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx47Q9CWX9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx47Q9CWX9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx47Q9CWX9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx47Q9CWX9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx47Q9CWX9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx47Q9CWX9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx47Q9CWX9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx47Q9CWX9 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.15■□□□□ 0.98
Ddx47Q9CWX9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx47Q9CWX9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx47Q9CWX9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx47Q9CWX9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx47Q9CWX9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx47Q9CWX9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx47Q9CWX9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Ddx47Q9CWX9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.11■□□□□ 0.97
Ddx47Q9CWX9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx47Q9CWX9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx47Q9CWX9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Ddx47Q9CWX9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx47Q9CWX9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.08■□□□□ 0.97
Ddx47Q9CWX9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx47Q9CWX9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx47Q9CWX9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx47Q9CWX9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx47Q9CWX9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx47Q9CWX9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx47Q9CWX9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms