Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf135Q9CWS1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf135Q9CWS1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf135Q9CWS1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf135Q9CWS1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rnf135Q9CWS1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf135Q9CWS1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf135Q9CWS1 Gm9959-201ENSMUST00000068277 390 ntBASIC21.33■■□□□ 1.01
Rnf135Q9CWS1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf135Q9CWS1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rnf135Q9CWS1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf135Q9CWS1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf135Q9CWS1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.31■■□□□ 1
Rnf135Q9CWS1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf135Q9CWS1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf135Q9CWS1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Rnf135Q9CWS1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rnf135Q9CWS1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf135Q9CWS1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rnf135Q9CWS1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf135Q9CWS1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf135Q9CWS1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf135Q9CWS1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms