Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldnd1Q9CQX5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldnd1Q9CQX5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cldnd1Q9CQX5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.29■■□□□ 1
Cldnd1Q9CQX5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Gm10033-202ENSMUST00000211874 928 ntBASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.28■■□□□ 1
Cldnd1Q9CQX5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldnd1Q9CQX5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldnd1Q9CQX5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.27■■□□□ 1
Cldnd1Q9CQX5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldnd1Q9CQX5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldnd1Q9CQX5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cldnd1Q9CQX5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cldnd1Q9CQX5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldnd1Q9CQX5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.25■□□□□ 0.99
Cldnd1Q9CQX5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cldnd1Q9CQX5 Gm42778-201ENSMUST00000199644 553 ntBASIC21.25■□□□□ 0.99
Cldnd1Q9CQX5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldnd1Q9CQX5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldnd1Q9CQX5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldnd1Q9CQX5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cldnd1Q9CQX5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cldnd1Q9CQX5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cldnd1Q9CQX5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldnd1Q9CQX5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cldnd1Q9CQX5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldnd1Q9CQX5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldnd1Q9CQX5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.22■□□□□ 0.99
Cldnd1Q9CQX5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cldnd1Q9CQX5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldnd1Q9CQX5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.21■□□□□ 0.99
Cldnd1Q9CQX5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldnd1Q9CQX5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldnd1Q9CQX5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldnd1Q9CQX5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldnd1Q9CQX5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cldnd1Q9CQX5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Gm10602-201ENSMUST00000098239 609 ntBASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd1Q9CQX5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.19■□□□□ 0.98
Cldnd1Q9CQX5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cldnd1Q9CQX5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.19■□□□□ 0.98
Cldnd1Q9CQX5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldnd1Q9CQX5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldnd1Q9CQX5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cldnd1Q9CQX5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd1Q9CQX5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.17■□□□□ 0.98
Cldnd1Q9CQX5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd1Q9CQX5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd1Q9CQX5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.17■□□□□ 0.98
Cldnd1Q9CQX5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms